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Blast new sequence
Interactive overview table
View genes
Create new dataset
Create Voucher table
Create Gene table
Create GenBank FASTA file
Share data with GBIF
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Create voucher table:
Select sequences you want for a table by entering the voucher codes and gene codes.
Enter the required info to make yourself a table in MS Excel format
Voucher info:
Code
Order
Superfamily
Family
Subfamily
Tribe
Subtribe
Genus
Species
Subspecies
Author
Host org.
Type species
Alternative voucher code
Notes
Locality and collector info:
Country
Locality
Collector
Coll. date
Determined by
Minimum Altitude
Maximum Altitude
Latitude
Longitude
Choose what gene info to display:
Number of bases
Accession number
X/- (exists/empty)
Choose your field delimiter:
comma
tab
Choose taxonset:
Choose taxonset
Geometridae_TT
Lepidoptera
Basal Leps
for primer design
Limagroup
Katja_all_plantaginis
New genes
BrazArc
Geometridae
... and/or a list of voucher codes:
Enter one code per line
in the box below.
(with a -- sign before taxon
names to disable them from
the taxon set)
For example:
CP100-10
CP100-11
--S078-21
and so on...
Create dataset
Choose geneset:
Choose geneset
NSG set
LepTree set
New genes
Limacodidae
Geo_set
NSG set with Wgl400
Full set
8 NSG-16 LepTree
NSG+LepTree+Zyga_bis
NSG+LepTree+Tortri
NSG+LepTree+ND1
NSG+wglGele+LepTre
8 NSG-16 LepTree-wgl400
NSG+LepTree+Zyga Tris
55 gene fragments
Check to select your alignment/gene:
(if geneset chosen, adds extra genes)
12s_Zyga
16s_Zyga
18s_Zyga
28S_tortri
AFG3a
AFG3b
ANK13C
ArgK
ATP6
ATP8
Ca2
Ca-ATPase
CAD
chitinase
COI-begin
COI-end
COII
COII-COI
COIII
CR
Cullin5
CycY
CYT-b
CYT-b-end
DDC
DDX23
EF1a-begin
EF1a-center
EF1a-end
Exp1
FCF1
GAPDH
GLYP
IDH
KRR1
LeuZip
MDH
MK6
MMP41
MPP2
NC
ND1
ND1_Zyga
ND2
ND3
ND4
ND4L
ND5
ND6
Nex9
PolII
ProSup
PSb
RpS2
RpS5
SARAH
Ssu72
TIF3Cb
TIF6
UDPG6DH
VPS4
WD40
Wgl400
wglGele
wglZyg
wingless
WntGeo
xACC
xala
xAMPd
xCAD
xDDC
xeno
xgel
xGPD
xGPI
xgpts
xGS
xGTPb
xhis
xnuc
xper
xPGDH
xPS
xTFS
xTPI
z16S
z28S